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Ecommerce Bookkeeper
COGS, platform fees, payouts — reconciled.

Shopify payouts don't match your bank deposits. Your platform reports show revenue but not profit. And somewhere in the COGS and fees, your actual margin is a mystery. I reconcile the numbers every month so you know what you're actually making.

$100

Starting /month

8+

Years experience

24hr

Response time

QuickBooks ProAdvisor Xero Certified Remote & Worldwide No contracts

What you get every month

  • Shopify / WooCommerce payouts reconciled
  • COGS separated from operating expenses
  • Returns, refunds & chargebacks tracked
  • Platform fees correctly categorised
  • Inventory balance kept accurate
  • Multi-channel revenue summary delivered
Starting from $100/month

First consultation is free. No obligation.

Full scope

What ecommerce bookkeeping includes

Ecommerce finances are more complex than a plain service business. Here is exactly what I handle each month to keep your numbers accurate across all channels.

Shopify / WooCommerce Payout Reconciliation

Each platform payout matched to gross sales, with Shopify fees, refunds, and chargebacks separated out. Bank deposits confirmed against the net payout — so the numbers always tie.

Cost of Goods Sold (COGS) Tracking

The purchase cost of every unit sold moved from inventory to COGS — not lumped in with operating expenses. This is the single most important distinction in ecommerce bookkeeping.

Returns, Refunds & Chargebacks

Returns reversed correctly — both the revenue and the COGS — so refunded orders don't inflate income or distort your margin calculations.

Payment Processor Fee Categorisation

Stripe, PayPal, Shopify Payments, and Shop Pay fees recorded as separate expense line items — not netted against revenue, which would understate your income.

Inventory Accounting

Inventory balance maintained on your balance sheet as an asset, updated as stock is purchased and sold. Periodic reconciliation to catch shrinkage or supplier discrepancies.

Multi-Channel Revenue Summary

Revenue from Shopify, WooCommerce, Etsy, Amazon, and any other channel separated out in your P&L — so you know which channel actually makes money.

Selling on multiple platforms or carrying complex inventory? Get a custom quote →

Remote process

How remote bookkeeping works for ecommerce

The entire process runs through cloud accounting software. No paper, no mailing documents, no in-person meetings required.

01

Connect your software

Grant me accountant-level access to your QuickBooks Online or Xero account. If you're not set up yet, I can help you configure the chart of accounts correctly for an ecommerce business from the start. No passwords shared — access is through the platform's own permission system.

02

I handle the books

Every month I categorize your transactions, reconcile every account, update your receivables and payables, and check for errors. This includes reconciling Shopify payouts against actual bank deposits to ensure the two match exactly.

03

You get your summary

I send you a brief monthly summary via WhatsApp or email — what the key numbers show, anything that needs your attention, and a link to your updated reports in QuickBooks or Xero.

Not on QuickBooks or Xero yet? That's fine. For ecommerce businesses, the chart of accounts setup matters more than usual — getting COGS, inventory, and platform fees structured correctly from the start saves significant cleanup later. I handle this during onboarding.

Want to see the exact steps? Read the full 4-step onboarding walkthrough →

Best fit

Ecommerce businesses that work best with a bookkeeper

If any of these describe your situation, your books need more than basic software — they need someone who understands how ecommerce finances actually work.

You sell on Shopify, WooCommerce, Etsy, or Amazon

Each platform handles fees and payouts differently. Without reconciliation, your income is always overstated.

You're unsure of your actual profit after fees

Revenue minus COGS minus platform fees minus operating costs equals your actual profit. If you don't know that number, you don't know your business.

Inventory cost is mixed with operating expenses

If your stock purchases hit the same expense category as your ads and software, your P&L is misleading every single month.

Platform reports don't match your bank

Shopify shows one number; your bank shows another. The gap is fees, refunds, and timing differences — all of which need to be reconciled.

Why not just use your platform reports?

Shopify reports vs. actual bookkeeping

Shopify's analytics, Amazon Seller Central, and similar dashboards tell you what you sold. They don't tell you what you actually made.

Working with me Shopify / Amazon reports
Shows gross revenue Yes Yes
Subtracts COGS to show gross profit Yes — monthly No
Reconciles payout to bank deposit Yes — every payout No
Tracks operating expenses against revenue Yes — full P&L No
Produces tax-ready financials Yes No
Starting cost From $100/month Free — but incomplete

Credentials

Certified, experienced, reachable

8+

Years in accounting & finance

QBO

QuickBooks Online ProAdvisor Certified

Xero

Xero Certified Level 1 Associate

24hr

Direct WhatsApp & email response

See full case studies →  ·  About me →

Transparent pricing

Ecommerce bookkeeping pricing

Ecommerce pricing scales with order volume and number of sales channels. A small single-channel store typically falls in the starter tier. No hidden fees, no annual contracts.

Monthly Bookkeeping

$100/month

Starting price for a single-channel ecommerce store with moderate order volume.

  • Payout reconciliation
  • COGS & inventory tracking
  • Returns & refunds handled
  • Monthly P&L & balance sheet
  • WhatsApp & email support
Get a Quote

Cleanup + Ongoing

Custom

If your ecommerce books have months of miscategorised COGS or unreconciled payouts, we start with a cleanup then move to monthly support.

  • COGS reclassified from backlog
  • All payouts reconciled
  • Inventory balance restored
  • Transition to monthly support
Discuss Your Situation

Final pricing depends on order volume, number of channels, and scope. See full pricing breakdown →

Common questions

Ecommerce bookkeeping FAQ

Ecommerce bookkeeping adds layers that don't exist in service businesses: COGS must be separated from operating expenses, platform payouts need to be reconciled against bank deposits, returns and refunds must be tracked and reversed correctly, and payment processor fees must be categorised separately from revenue. Inventory accounting is also required if you hold stock. These complexities mean a plain bookkeeper unfamiliar with ecommerce will often misclassify income and expenses.

In QuickBooks Online, COGS is tracked as a separate expense account that records the purchase cost of every unit sold — not the selling price. When you sell a product, revenue goes to an income account and the cost of that product moves from inventory (an asset) to COGS (an expense). This requires correctly setting up products with their purchase cost and reconciling inventory counts periodically. Getting this wrong overstates your profit.

Platform reports show gross revenue — the total amount customers paid. They don't subtract your COGS, operating expenses (storage, shipping supplies, advertising), payment processor fees, or returns still being processed. Shopify's payout reports also net out fees before depositing, meaning the bank deposit doesn't match the gross revenue figure. Reconciling all of this is where most ecommerce owners lose visibility into their actual margin.

Shopify batches sales into payouts and deposits a net amount to your bank after deducting its fees. I reconcile each payout by matching it to the gross sales, subtracting Shopify fees, refunds, and chargebacks, and confirming the net matches what landed in your bank. Income is recorded at gross revenue with fees as a separate expense — correct for both P&L accuracy and tax purposes.

If you hold physical stock that you purchase and resell, yes — inventory needs to appear on your balance sheet as an asset, and the cost of items sold moves to COGS as they're sold. Without this, your P&L shows expenses when you buy stock rather than when you actually sell, which significantly distorts reported profit each month. For ecommerce businesses with any meaningful stock level, correct inventory accounting is essential.

Get in touch

Ready to know your
actual ecommerce profit?

Send a message with your platforms, current accounting setup, and what's not working.
First conversation is free.

8+ years experience
24hr reply guarantee
Free first call

Currently accepting new clients · Nepal & international